1) A Honda prelude doesn't have "headers". It's an inline 4, at best, it has a single header.
2) You don't put a cold air intake and a supercharger on the same car. Because: 1) a CAI doesn't do anything for performance, and 2) A supercharger kit will come with it's own intake equipment. Even if it didn't, a standard CAI wouldn't fit with a blower on there.
The supercharger on my car is no longer made, so I'm not going to recommend it to you. I've seen supercharged hondas by both Jackson Racing and Vortech, and the Jackson Racing car was performing better.
I know a bit about supercharging, after doing it to my car, but not that much about Hondas.