Originally posted by: jonnyGURU
You're confused.
Mulitple leads do not come from multiple rails. You can have 1,000 leads but all of the +5V and +3.3V is going to come from the same source, or "rail", inside the power supply.
Dual rails means dual 12V rails, and those mutliple rails do not allow the user to "choose" what rail powers what as +12V1 is always on the 4-pin P4 connector and +12V1 is always everything else.
This varies when you have a tri-rail which puts PCI-es on their own +12V rail or quad rail where the two CPU's on an 8-pin EPS connector or each PCI-e connector are put on their own +12V rail.
If moving connectors around inside your case yields better stability then the problem is not "rail" related. You either have a very crappy power supply with very thin gage wires that can not handle the additional amperage of multiple components on it, or you have a bent pin in one of the connectors somewhere that's causing resistance and screwing things up.
Also, you wouldn't want to put dissimilar devices together on a lead because one device may "dirty" the voltage for another on that same lead. For example: plugging an inverter for for a CCFL in line with your PCI-e connector would be a bad idea.
Not only that but many "dual rail" PSUs are internally single rail designs with split (limited) outputs.